CDS

Accession Number TCMCG007C05144
gbkey CDS
Protein Id XP_009125531.1
Location complement(join(2555126..2555245,2555452..2555670,2555771..2555900,2555994..2556262,2556487..2557975,2558185..2558313,2558415..2558518,2558610..2558704,2558864..2558921,2559136..2559190,2559296..2559366))
Gene LOC103850523
GeneID 103850523
Organism Brassica rapa

Protein

Length 912aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA249065
db_source XM_009127283.3
Definition transcription factor MYB3R-1 isoform X2 [Brassica rapa]

EGGNOG-MAPPER Annotation

COG_category K
Description Myb-like DNA-binding domain
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko03000        [VIEW IN KEGG]
KEGG_ko ko:K09420        [VIEW IN KEGG]
EC -
KEGG_Pathway ko04151        [VIEW IN KEGG]
ko05166        [VIEW IN KEGG]
map04151        [VIEW IN KEGG]
map05166        [VIEW IN KEGG]
GOs GO:0000981        [VIEW IN EMBL-EBI]
GO:0000988        [VIEW IN EMBL-EBI]
GO:0000989        [VIEW IN EMBL-EBI]
GO:0001067        [VIEW IN EMBL-EBI]
GO:0001076        [VIEW IN EMBL-EBI]
GO:0001134        [VIEW IN EMBL-EBI]
GO:0001135        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003676        [VIEW IN EMBL-EBI]
GO:0003677        [VIEW IN EMBL-EBI]
GO:0003700        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0006355        [VIEW IN EMBL-EBI]
GO:0006357        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008285        [VIEW IN EMBL-EBI]
GO:0009889        [VIEW IN EMBL-EBI]
GO:0009890        [VIEW IN EMBL-EBI]
GO:0009891        [VIEW IN EMBL-EBI]
GO:0009892        [VIEW IN EMBL-EBI]
GO:0009893        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010468        [VIEW IN EMBL-EBI]
GO:0010556        [VIEW IN EMBL-EBI]
GO:0010557        [VIEW IN EMBL-EBI]
GO:0010558        [VIEW IN EMBL-EBI]
GO:0010564        [VIEW IN EMBL-EBI]
GO:0010604        [VIEW IN EMBL-EBI]
GO:0010605        [VIEW IN EMBL-EBI]
GO:0010628        [VIEW IN EMBL-EBI]
GO:0010629        [VIEW IN EMBL-EBI]
GO:0019219        [VIEW IN EMBL-EBI]
GO:0019222        [VIEW IN EMBL-EBI]
GO:0030154        [VIEW IN EMBL-EBI]
GO:0031323        [VIEW IN EMBL-EBI]
GO:0031324        [VIEW IN EMBL-EBI]
GO:0031325        [VIEW IN EMBL-EBI]
GO:0031326        [VIEW IN EMBL-EBI]
GO:0031327        [VIEW IN EMBL-EBI]
GO:0031328        [VIEW IN EMBL-EBI]
GO:0032465        [VIEW IN EMBL-EBI]
GO:0032502        [VIEW IN EMBL-EBI]
GO:0042127        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043565        [VIEW IN EMBL-EBI]
GO:0044212        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0045892        [VIEW IN EMBL-EBI]
GO:0045893        [VIEW IN EMBL-EBI]
GO:0045934        [VIEW IN EMBL-EBI]
GO:0045935        [VIEW IN EMBL-EBI]
GO:0048518        [VIEW IN EMBL-EBI]
GO:0048519        [VIEW IN EMBL-EBI]
GO:0048522        [VIEW IN EMBL-EBI]
GO:0048523        [VIEW IN EMBL-EBI]
GO:0048583        [VIEW IN EMBL-EBI]
GO:0048585        [VIEW IN EMBL-EBI]
GO:0048869        [VIEW IN EMBL-EBI]
GO:0050789        [VIEW IN EMBL-EBI]
GO:0050794        [VIEW IN EMBL-EBI]
GO:0051171        [VIEW IN EMBL-EBI]
GO:0051172        [VIEW IN EMBL-EBI]
GO:0051173        [VIEW IN EMBL-EBI]
GO:0051252        [VIEW IN EMBL-EBI]
GO:0051253        [VIEW IN EMBL-EBI]
GO:0051254        [VIEW IN EMBL-EBI]
GO:0051302        [VIEW IN EMBL-EBI]
GO:0051726        [VIEW IN EMBL-EBI]
GO:0060255        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0080090        [VIEW IN EMBL-EBI]
GO:0097159        [VIEW IN EMBL-EBI]
GO:0140110        [VIEW IN EMBL-EBI]
GO:1901181        [VIEW IN EMBL-EBI]
GO:1901363        [VIEW IN EMBL-EBI]
GO:1902679        [VIEW IN EMBL-EBI]
GO:1902680        [VIEW IN EMBL-EBI]
GO:1903506        [VIEW IN EMBL-EBI]
GO:1903507        [VIEW IN EMBL-EBI]
GO:1903508        [VIEW IN EMBL-EBI]
GO:2000112        [VIEW IN EMBL-EBI]
GO:2000113        [VIEW IN EMBL-EBI]
GO:2001023        [VIEW IN EMBL-EBI]
GO:2001024        [VIEW IN EMBL-EBI]
GO:2001038        [VIEW IN EMBL-EBI]
GO:2001039        [VIEW IN EMBL-EBI]
GO:2001141        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGAAGCCTGAGATGAAAGCCCCCAATGTTAAAGAAGGTGGTTCCCAGGGAAACCTGCAAGGGAAACATGGGAGGACGTGTGGCCCTACAAGACGATCCACTAAAGGACAATGGACCCCCGAAGAGGACGAAGTCTTGTGCAAAGCTGTCGAGCGTTTTCAAGGAAAGAACTGGAAGAAGATAGCTGAATGTGTTAAGGACCGGACTGATGTCCAGTGTCTTCACAGATGGCAAAAGGTCTTGAACCCAGAGCTTGTGAAAGGGCCTTGGTCCAAAGAGGAGGATAACACAATAATTGCTCTGGTAGAAAAATATGGTCCATCGAAATGGTCTACTATTTCTCAGCATTTACCTGGGCGCATTGGAAAGCAATGTAGAGAAAGGTGGCATAACCATCTTAACCCTGGCATCAATAAAAATGCATGGACCCAGGAAGAGGAACTTACTCTTATTCGTGCACATCAAATTTATGGGAATAAATGGGCAGAGCTAATGAAGTTTTTGCCAGGAAGGTCAGACAATGCAATAAAAAATCACTGGAACAGCGCAGTTAAGAAGAAGTTGGATTCCTACTACGCATCAGGTCTTTTAGATCAGTGTCAAAGCTCGCCACTCGTTGCTCTTCAGAACAGATCCGTAGCTTCATCTTCCTCGTTGATGCACAGCAGTGGAGATGAAAGTAATTTCAGGCAAGGGGCTGATGCTGAAGAATCAGAATGCAGCCAAGCTTCAACTGTTTTTAGTTGTTCACAGTCGAACAATGATTTGCTAGACGAGGTTAAACCTCCAAATGAAGAGTTCTACATTCCTGAATTGCTTTCAGGATTGGAGCAGCAAGTCTCAAACTCTCCATCTCATGCAGAATCTTACTGCCCTTCCTTTGAAGATGTTAAAATTGTTGTCCCCGAGGTTAGAACCACCACAGCTACAGAGGATCACTTGCAGGGCGTGTCTAACAATGTTAGACAGGATCTCAGTCTAGACTGTCCTCAGTTATTGGCTCATAACATGGATGGAGATGAAAAAAATGAAGCATGCCAGGCTTTTCAAGATTCTGTCAAATTAAGTGATCAACCTTCTTTGCCAAACTCGGACACAAGTATTCATCCACAACCTCAAACTTTGACTACGGACGTGGAGTGTTGTAGGGTTCTTTTCCCATATGCCATGAAAGATAATGGTACATCTTCTGGTGAGCAAGGTCAGAACATGGTTGACCCTCCAAAGGGCAAAGGAGAAGAAACAAATGCTCATGAAACGGGAAACATTCCAGCTTTATCTTGGCATCAATCAAATTCTGAGAGCCTGGAGGGTCATAATGGTGTTACTTTATTATATTCAGCTGTGGAGGACTCAGTTTTACTCCACAATGATTCTGCTCAAGATTGTGATCTCCTTGGAGCTACTGCATTAGAACGTGAAACTGATACAAATGATGGCAATGATGATAATGATGGCATCCCAGAATCATATATTACCAAGGATTTTTTGAAGCTAGTACCTCTGAATAACTTTGCCTCTCCTTCTAGAGTGAACAAGATTCATTTCCCTATTGACGAGAAGCCAGCTGAAAAGGACAAAGGATCTCTTTGTTATGAGCCTCCACGGTTTCCAAGTGCAGATATTCCTTTCTTCAGCTGTGATCTTGTACCATCAAACAGTGACTTAAGGCAAGAGTACAGTCCCTTTGGTATCCGCCAGTTGATGAATTGTACAACTCCGTTAAGGCTATGGGATTCACCGCGTCATGATAAGAGCCCTGATGTCAAAAGTTTCAGTGGTGCACCATCCATCTTAAAGAAGCGGCGTGGGGACTTGCTGCTGTCACCTATGCTTGATAGGAGAAAAGAAAAAATGGTGAAAAGTGCTAAGGCTTCCTCCTTGGCTTTAGATTTTTCAAGATTAGATGATTGCAATAAAAATAAACGTGCCTCCTCTTCCGAAGCCAAAGAGGATCCAAACGAAACCTTGGAGTCAGGAGGAGTGTCTTCAGCTAAAACTGACCAAGAAACTCGTAGGAGTTTGGTTTATTATAATGATGTTGGGATGCAAGTGAGCTCTCCTGATAAAGCTGGATCTAGACTGGATAACAAAGTGAATACAGTTGCGAAAGATCCATCAGACCAACACGAAAAGTCATTAGCTACTATTCCAACTGAAGAAATCTCGTCAGAACCTCCATTCACAGCAGACGAGATTCCTTTATCAGTAATCTCAGGAATTAAAACCAACACTGCAGAGAGTAGTGTAGATATTGAAACCTTCAGCATATTTGATGGAACTCCGTTCAAAAAACTCCTTGATACCCCATCACCATGGAAGTCATCACCATGGAAATCACCTTTACTCTTTGGATCTTTCTTGCAAAGCCAAAATTTGGATCCAGATATTACACTTGAGGATATTGGGTGCTTTATGAGTCCCGGAGAGAGAAGTTATGATGCCATAGGACTGATGAAACACTTGAGTGAACACACAGCTACGGCATATGCAGATGCTTTGGAAGTCTTGGGTAATGACACACCTGAAACGATACTCAAGAAGAGACGGCTGAACAAATCTATTCAAGGGAAAGAAAATCAACACTGGCCTCATGATCAACTTGAAAACCGATCCCAGGTGGAGGGTCGAGCTTTGGACTTCAGTAACTGTGGGACACCGGGGAAAGCAAAGGTATCATCTGCTTCTCCAGGCAGCTACTCGAGCCCATCATCTTACCTTTTGAAGAGTTGCAGGTAG
Protein:  
MKPEMKAPNVKEGGSQGNLQGKHGRTCGPTRRSTKGQWTPEEDEVLCKAVERFQGKNWKKIAECVKDRTDVQCLHRWQKVLNPELVKGPWSKEEDNTIIALVEKYGPSKWSTISQHLPGRIGKQCRERWHNHLNPGINKNAWTQEEELTLIRAHQIYGNKWAELMKFLPGRSDNAIKNHWNSAVKKKLDSYYASGLLDQCQSSPLVALQNRSVASSSSLMHSSGDESNFRQGADAEESECSQASTVFSCSQSNNDLLDEVKPPNEEFYIPELLSGLEQQVSNSPSHAESYCPSFEDVKIVVPEVRTTTATEDHLQGVSNNVRQDLSLDCPQLLAHNMDGDEKNEACQAFQDSVKLSDQPSLPNSDTSIHPQPQTLTTDVECCRVLFPYAMKDNGTSSGEQGQNMVDPPKGKGEETNAHETGNIPALSWHQSNSESLEGHNGVTLLYSAVEDSVLLHNDSAQDCDLLGATALERETDTNDGNDDNDGIPESYITKDFLKLVPLNNFASPSRVNKIHFPIDEKPAEKDKGSLCYEPPRFPSADIPFFSCDLVPSNSDLRQEYSPFGIRQLMNCTTPLRLWDSPRHDKSPDVKSFSGAPSILKKRRGDLLLSPMLDRRKEKMVKSAKASSLALDFSRLDDCNKNKRASSSEAKEDPNETLESGGVSSAKTDQETRRSLVYYNDVGMQVSSPDKAGSRLDNKVNTVAKDPSDQHEKSLATIPTEEISSEPPFTADEIPLSVISGIKTNTAESSVDIETFSIFDGTPFKKLLDTPSPWKSSPWKSPLLFGSFLQSQNLDPDITLEDIGCFMSPGERSYDAIGLMKHLSEHTATAYADALEVLGNDTPETILKKRRLNKSIQGKENQHWPHDQLENRSQVEGRALDFSNCGTPGKAKVSSASPGSYSSPSSYLLKSCR